164.357 Spatial Omics
This course is in all assigned curricula part of the STEOP.
This course is in at least 1 assigned curriculum part of the STEOP.

2021W, VO, 1.3h, 2.0EC

Properties

  • Semester hours: 1.3
  • Credits: 2.0
  • Type: VO Lecture
  • Format: Distance Learning

Learning outcomes

After successful completion of the course, students are able to explain the most relevant bioanalytical methods providing spatially resolved information in tissue. Students will be familiarized with latest research and modern methods like in situ genomics and transcriptomics, spatial mass spectrometry for proteomics/metaboloimics/lipidomics/glycomics, singel cell multi-omics appraoches, fluorescence microscopy, super resolution microscopy and atomic force microscopy in the context of Omics.

Subject of course

Introduction to analytical approaches providing spatially resolved information for

  • Genomics
  • Transcritpomics
  • Proteomics
  • Metabolomics (including Lipidomics)
  • Glycomics
  • Singel Cell Analysis
  • Single Molecule Analysis
  • Multi-omics Technologies

Different technologies for targeted and untargeted analysis will be discussed.

Teaching methods

  • TUWEL course
  • Introduction Slides
  • advanced literature 
  • acquire in depth knowledge by studying and presenting case studies
  • weekly Q&A sessions to give each student the chance to not only present a case but also to gather and present knowledge necessery to understand the case in its full context
  • discussion of case studies in the group

Mode of examination

Oral

Additional information

Teaching material in English, presentations have to be held in English

Lecturers

Institute

Course dates

DayTimeDateLocationDescription
Wed17:15 - 18:0020.10.2021 https://tuwien.zoom.us/j/93265442682?pwd=VU9aUjJsRStsSWRCSzRPdFBiY1l0dz09Vorbesprechung und Semesterplanung

Examination modalities

  • depending on group size 1-3 (half-)days of presentations and discussion of latest publications by students - will be planned together with students

Course registration

Begin End Deregistration end
01.08.2021 12:00 15.10.2021 12:00

Registration modalities

In order to be able to plan this course, it is necessary to know the number of participants. At the introductory meeting, all details about the course will be announced and further appointments will be planned.

Curricula

Literature

up-to-date material will be available via TUWEL

Miscellaneous

  • Attendance Required!

Language

if required in English